BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E07LP1|AL428563
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1310 1639 0.0
>3x_Contig1310
Length = 7790
Score = 1639 bits (826), Expect = 0.0
Identities = 851/856 (99%), Gaps = 3/856 (0%)
Strand = Plus / Minus
Query: 1 aatgttgggcaattcctttatagcatactcaatagcatcctctttcgtcattgtgactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4012 aatgttgggcaattcctttatagcatactcaatagcatcctctttcgtcattgtgactgt 3953
Query: 61 tttggcaatattattccagtgctatgtatatccttttactgtgttgtttggatacgagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3952 tttggcaatattattccagtgctatgtatatccttttactgtgttgtttggatacgagta 3893
Query: 121 gttactttctcagttgctaaggctcatctctcaatattagactttttcactttaaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3892 gttactttctcagttgctaaggctcatctctcaatattagactttttcactttaaaagat 3833
Query: 181 gagagttctcaagttatgaaagaaaaggtggaaccgaatcagccaacaagaggtctattg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3832 gagagttctcaagttatgaaagaaaaggtggaaccga-tcagccaacaagaggtctattg 3774
Query: 241 taacaattgggtggctgtccaggtgatctcatgaagaatcatagactcgagaacttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3773 taacaattgggtggctgtccaggtgatctcatgaagaatcatagactcgagaacttggat 3714
Query: 301 cgaaagtagcagcttcggaagctttactgtcaaatggttgttaacgtcacattatcttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3713 cgaaagtagcagcttcggaagctttactgtcaaatggttgttaacgtcacattatcttgg 3654
Query: 361 actgacagacattaatacccgaacctttctataactatatataaatctaaacggtatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3653 actgacagacattaatacccgaacctttctataactatatataaatctaaacggtatagt 3594
Query: 421 tactgctggtgccacagcccagaagctgggtactactctaagtaaccgaagttcctggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3593 tactgctggtgccacagcccagaagctgggtactactctaagtaaccgaagttcctggat 3534
Query: 481 attgacacttattaagcagtgcagtgagtaggacgagctgcatgggcaagatgagcagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3533 attgacacttattaagcagtgcagtgagtaggacgagctgcatgggcaagatgagcagta 3474
Query: 541 tattgcttataagttcgactcaaaagatcccacttggatgaacagatttacatttcatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3473 tattgcttataagttcgactcaaaagatcccacttggatgaacagatttacatttcatat 3414
Query: 601 aaactgattctcgactaggcaatatacaccatgaagggccccaaatatctgcaacatgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3413 aaactgattctcgactaggcaatatacaccatgaagggccccaaatatctgcaacatgct 3354
Query: 661 tgtctggtcaacgatatcttacctggt-aaaccctaaatcaattataatagtagagacgt 719
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3353 tgtctggtcaacgatatcttacctggtaaaaccctaaatcaattataatagtagagacgt 3294
Query: 720 atgtccgggtaatctttccgatcaatagtataaaagtggcaaatttttcaacactttgaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3293 atgtccgggtaatctttccgatcaatagtataaaagtggcaaatttttcaacactttgaa 3234
Query: 780 cctctttcaaacactcttacagttcaaagattgg-aaatctttttgatgtatgtwcttaa 838
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 3233 cctctttcaaacactcttacagttcaaagattggaaaatctttttgatgtttgttcttaa 3174
Query: 839 taaaccaatcatcagt 854
||||||||||||||||
Sbjct: 3173 taaaccaatcatcagt 3158
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6045
Number of Sequences: 1807
Number of extensions: 6045
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)